The Chachapoyas region was conquered by the Inca Empire in the late 15th century. Knowledge of the fate of the local population has been based largely on Inca oral histories, written down only decades later after the Spanish conquest. The Inca accounts claim that the native population was forcibly resettled out of Chachapoyas and dispersed across the Inca Empire. However, a new study in Scientific Reports, by an international team including researchers from the Max Planck Institute for the Science of Human History, uses genetic evidence to reveal that despite Inca conquest, the population of Chachapoyas has remained genetically distinct, and not assimilated with that of the Inca heartland.